DeepView / Swiss-PdbViewer
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Version 3.7 (SP5)
http://www.expasy.org/spdbv/
Nicolas Guex,Alexandre Diemand & Torsten Schwede
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DESCRIPTION
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Swiss-PdbViewer is an application that provides a user friendly
interface allowing to analyse several proteins at the same time.
The proteins can be superimposed in order to deduce structural
alignments and compare their active sites or any other relevant
parts,Amino acid mutations,H-bonds,angles and distances between
atoms are easy to obtain thanks to the intuitive graphic and menu
interface,
Moreover,Swiss-PdbViewer is tightly linked to Swiss-Model,an
automated homology modelling server accessible from ExPASy
Working with these two programs greatly reduces the amount of
work necessary to generate models,as it is possible to thread
a protein primary sequence onto a 3D template and get an immediate
feedback of how well the threaded protein will be accepted by the
reference structure before submitting a request to build missing
loops and refine sidechain packing.
NOTE for Win NT:
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SPDBV is writing temporary files while running,Please make
sure,that the installation directory (e.g,C:\spdbv) and
all subdirectories have the correct Read/Write permissions
for all users working with this installation.
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